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Comprehensive analysis of both long and short read transcriptomes of a clonal and a seed-propagated model plant species reveal the prerequisites for transcriptional activation of autonomous and non-autonomous transposons in plants

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Authors
Chen, Ting-Hsuan, Winefield, Christopher
Date
2021-09-28
Type
Preprint Server Paper
Collections
Department of Wine, Food and Molecular Biosciences
Keywords
alternative splicing, differential expression, nanopore sequencing, stress treatment, transcription, transposable element
Fields of Research
ANZSRC::310504 Epigenetics (incl. genome methylation and epigenomics), ANZSRC::310803 Plant cell and molecular biology, ANZSRC::310204 Genomics and transcriptomics, ANZSRC::300805 Oenology and viticulture
Abstract
Transposable element (TE) transcription is a precursor to its mobilisation in host genomes. However, the characteristics of expressed TE loci, the identification of self-competent transposon loci contributing to new insertions, and the genomic conditions permitting their mobilisation remain largely unknown.
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Permalink
https://hdl.handle.net/10182/14515
Source DOI
10.21203/rs.3.rs-859670/v1
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© The Authors.
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